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Thames Valley & Surrey Secure Data Environment

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  1. oxford-omop-data-mapper oxford-omop-data-mapper Public

    A documentation-centric DuckDB based ETL tool, implementing transformations of a number of common clinical datasets into the OMOP CDM.

    C# 10

  2. omop-rag omop-rag Public

    A CLI tool to accurately map unstructured clinical text to standardised OMOP Common Data Model (CDM) concepts. It uses an entirely local Retrieval-Augmented Generation (RAG) pipeline.

    Python 2 1

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  • oxford-omop-data-mapper Public

    A documentation-centric DuckDB based ETL tool, implementing transformations of a number of common clinical datasets into the OMOP CDM.

    tvs-sde/oxford-omop-data-mapper’s past year of commit activity
    C# 10 Apache-2.0 0 0 4 Updated Feb 10, 2026
  • omop-rag Public

    A CLI tool to accurately map unstructured clinical text to standardised OMOP Common Data Model (CDM) concepts. It uses an entirely local Retrieval-Augmented Generation (RAG) pipeline.

    tvs-sde/omop-rag’s past year of commit activity
    Python 2 Apache-2.0 1 0 3 Updated Feb 5, 2026

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