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@SCIInstitute

The Scientific Computing and Imaging Institute

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  1. SCIRun SCIRun Public

    SCIRun is a Problem Solving Environment, for modeling, simulation and visualization of scientific problems. This is version 5, the upgraded version of SCIRun v4.

    C++ 134 74

  2. fluorender fluorender Public

    FluoRender is an interactive tool for fluorescence microscopy data visualization and analysis

    C++ 46 11

  3. dSpaceX dSpaceX Public

    dSpaceX Visualization Library and Tool

    C++ 5 2

  4. Seg3D Seg3D Public

    Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.

    C++ 119 46

  5. ShapeWorks ShapeWorks Public

    ShapeWorks

    C++ 126 35

Repositories

Showing 10 of 66 repositories
  • SCIRun Public

    SCIRun is a Problem Solving Environment, for modeling, simulation and visualization of scientific problems. This is version 5, the upgraded version of SCIRun v4.

    SCIInstitute/SCIRun’s past year of commit activity
    C++ 134 74 379 (4 issues need help) 4 Updated Jan 21, 2026
  • DBSpipeline Public

    simulation pipeline for DBS stimulation and RNS stimulation

    SCIInstitute/DBSpipeline’s past year of commit activity
    Python 0 MIT 0 12 0 Updated Jan 21, 2026
  • fluorender Public

    FluoRender is an interactive tool for fluorescence microscopy data visualization and analysis

    SCIInstitute/fluorender’s past year of commit activity
    C++ 46 11 1 0 Updated Jan 20, 2026
  • Seg3D Public

    Seg3D is a free volume segmentation and processing tool developed by the NIH Center for Integrative Biomedical Computing at the University of Utah Scientific Computing and Imaging (SCI) Institute.

    SCIInstitute/Seg3D’s past year of commit activity
    C++ 119 46 134 (1 issue needs help) 3 Updated Jan 15, 2026
  • ShapeWorks Public

    ShapeWorks

    SCIInstitute/ShapeWorks’s past year of commit activity
    C++ 126 35 200 5 Updated Jan 15, 2026
  • UncertainSCI Public
    SCIInstitute/UncertainSCI’s past year of commit activity
    Python 11 MIT 11 23 (1 issue needs help) 1 Updated Dec 3, 2025
  • ITKCleaver Public

    Wrapper for Cleaver to use as an ITK filter

    SCIInstitute/ITKCleaver’s past year of commit activity
    C++ 4 MIT 4 10 6 Updated Nov 15, 2025
  • PFEIFER Public

    Signal processing toolbox for cardiac potential recordings.

    SCIInstitute/PFEIFER’s past year of commit activity
    MATLAB 3 MIT 7 5 0 Updated Feb 18, 2025
  • PublicationSystemHackathon Public

    Collaborative effort to build a better publication tracking and recording system

    SCIInstitute/PublicationSystemHackathon’s past year of commit activity
    Python 0 MIT 0 0 0 Updated Jan 21, 2025
  • DeveloperTools Public

    This repo contains scripts that download and report download stats on other github repos.

    SCIInstitute/DeveloperTools’s past year of commit activity
    Inno Setup 1 0 1 0 Updated Dec 3, 2024