Distinguish spot-based vs single-cell platforms for annotation/deconv…#2
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Distinguish spot-based vs single-cell platforms for annotation/deconv…#2
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…olution routing Add platform-aware guidance so the agent correctly routes spot-based data (Visium, Slide-seq, ST) to spatial_deconvolution and single-cell resolution data (MERFISH, Xenium, CosMx, SeqFISH) to annotation.
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thx! I agree that two modalities could benefit from more tailiored context. Could you add some notebooks in the notebooks folder under the branch https://github.com/Genentech/SpatialAgent/tree/case I want to see how the agent perform on the two types of data after updating the skills. |
hansen7
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Feb 17, 2026
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provide use cases (annotation on two kinds of spatial data)
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…olution routing
Add platform-aware guidance so the agent correctly routes spot-based data (Visium, Slide-seq, ST) to spatial_deconvolution and single-cell resolution data (MERFISH, Xenium, CosMx, SeqFISH) to annotation.