trouble installing v3.0.1

[jeramiahsmith]

I'm trying to install the newest version of cactus ( cactus-bin-v3.0.1 and cactus-bin-legacy-v3.0.1 ). Following the install instruction "python3 -m pip install -U ." dies with an error (below). I wonder if I am missing a dependency or something.

  running install
  /scratch/jjsmit3/bin/cactus-bin-v3.0.1/venv-cactus-v3.0.1/bin/python3: No module named pip
  Traceback (most recent call last):
    File "/scratch/jjsmit3/bin/cactus-bin-v3.0.1/venv-cactus-v3.0.1/lib/python3.12/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 389, in <module>
      main()
    File "/scratch/jjsmit3/bin/cactus-bin-v3.0.1/venv-cactus-v3.0.1/lib/python3.12/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 373, in main
      json_out["return_val"] = hook(**hook_input["kwargs"])
                               ^^^^^^^^^^^^^^^^^^^^^^^^^^^^
    File "/scratch/jjsmit3/bin/cactus-bin-v3.0.1/venv-cactus-v3.0.1/lib/python3.12/site-packages/pip/_vendor/pyproject_hooks/_in_process/_in_process.py", line 280, in build_wheel
      return _build_backend().build_wheel(
             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/build_meta.py", line 435, in build_wheel
      return _build(['bdist_wheel', '--dist-info-dir', str(metadata_directory)])
             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/build_meta.py", line 423, in _build
      return self._build_with_temp_dir(
             ^^^^^^^^^^^^^^^^^^^^^^^^^^
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/build_meta.py", line 404, in _build_with_temp_dir
      self.run_setup()
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/build_meta.py", line 512, in run_setup
      super().run_setup(setup_script=setup_script)
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/build_meta.py", line 317, in run_setup
      exec(code, locals())
    File "<string>", line 25, in <module>
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/__init__.py", line 115, in setup
      return distutils.core.setup(**attrs)
             ^^^^^^^^^^^^^^^^^^^^^^^^^^^^^
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/_distutils/core.py", line 186, in setup
      return run_commands(dist)
             ^^^^^^^^^^^^^^^^^^
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/_distutils/core.py", line 202, in run_commands
      dist.run_commands()
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 1002, in run_commands
      self.run_command(cmd)
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/dist.py", line 1102, in run_command
      super().run_command(command)
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 1021, in run_command
      cmd_obj.run()
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/command/bdist_wheel.py", line 405, in run
      self.run_command("install")
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/_distutils/cmd.py", line 357, in run_command
      self.distribution.run_command(command)
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/dist.py", line 1102, in run_command
      super().run_command(command)
    File "/tmp/pip-build-env-xry61ruc/overlay/lib/python3.12/site-packages/setuptools/_distutils/dist.py", line 1021, in run_command
      cmd_obj.run()
    File "<string>", line 22, in run
    File "/mnt/gpfs3_amd/share/apps/amd/Miniconda3-2025/lib/python3.12/subprocess.py", line 571, in run
      raise CalledProcessError(retcode, process.args,
  subprocess.CalledProcessError: Command '['/scratch/jjsmit3/bin/cactus-bin-v3.0.1/venv-cactus-v3.0.1/bin/python3', '-m', 'pip', 'install', 'submodules/sonLib']' returned non-zero exit status 1.
  [end of output]

note: This error originates from a subprocess, and is likely not a problem with pip.
ERROR: Failed building wheel for Cactus
Failed to build Cactus
error: failed-wheel-build-for-install

× Failed to build installable wheels for some pyproject.toml based projects
╰─> Cactus

[jeramiahsmith]

Sorry, this is because I didn't have cmake active in the environment.